Protein ZmALF1
ZmALF1 is a protein in the Alfin-like family.
Information
TF Name: ZmALF1
Species: Maize
TF Family: Alfin-like
Gene Name(Synonym): ALF1
Uniprot ID: B4FEW2

Protein ZmALF1

ZmALF1 is a protein in the Alfin-like family.

Overview of domains present in v5 transcripts
Alfin-likePF00628PF12165
Zm00001eb282300_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d037537DAPseq no logo sequence fimo position
Zm00001d037537DAPseq no logo sequence fimo position
Zm00001d037537ChIPseq no logo sequence fimo position
Zm00001d037537PChIPseq no logo sequence fimo position

Interactions where ZmALF1 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmALF1 is the target  
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There are 49 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb282300_T001 from maize genome v5

Amino Acid Sequence
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MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSGGVKQSKERDRSGTDNS
GRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPL

MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSGGVKQSKERDRSGTDNS
GRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPL

MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSGGVKQSKERDRSGTDNS
GRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPL

MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSGGVKQSKERDRSGTDNS
GRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPL

MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSGGVKQSKERDRSGTDNS
GRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPL

MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSGGVKQSKERDRSGTDNS
GRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPL

MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSGGVKQSKERDRSGTDNS
GRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPL

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF12165
PF00628
Alfin-like
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Nucleotide Sequence
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ATCCGCTGGGGCCCACACGAAAAAA...

GRMZM2G148810_T01 from maize genome v3


Related TFome: pUT1441

Amino Acid Sequence
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MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSGGVKQSKERDRSGTDNS
GRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPL

Nucleotide Sequence
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CTGGGGCCCACACGAAAAAATAGCC...

GRMZM2G148810_T02 from maize genome v3

Amino Acid Sequence
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MPPTAAPVPEAVLLPAPSRTSTRTTAPAAPPSSAPSPTTSRSSTRCAIQENLCLYGYANEAWEVALPAEEVPTELPEPAL
GINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSGGVKQSKERDRSGTDNSGRN
KLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYKCPS
CCNSKRPRPL

Nucleotide Sequence
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CTGGGGCCCACACGAAAAAATAGCC...

GRMZM2G148810_T03 from maize genome v3

Amino Acid Sequence
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MPPTAAPVPEAVLLPAPSRTSTRTTAPAAPPSSAPSPTTSRSSTRCAIQVSLLPLAISPPWPSIRFGCELMVCGWGWMSL
EKENLCLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFG
MMNDLPTVFEVVSGGVKQSKERDRSGTDNSGRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEF
WIGCDVCEKWYHGKCVKITPAKAESIKQYKCPSCCNSKRPRPL

Nucleotide Sequence
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ACTCGTCCTAGTGTACTATCATCTC...

GRMZM2G148810_T04 from maize genome v3

Amino Acid Sequence
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MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRRLRWCEAI

Nucleotide Sequence
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ACTCGTCCTAGTGTACTATCATCTC...

Zm00001d037537_T001 from maize genome v4

Amino Acid Sequence
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MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRLYSQGFLRALPLTSQSTKSKVVSGGVKQSKERDRS
GTDNSGRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAES
IKQYKCPSCCNSKRPRPL

Nucleotide Sequence
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GAAAAAATAGCCCGCAAGATCTTGC...

Zm00001d037537_T002 from maize genome v4

Amino Acid Sequence
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MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSGGVKQSKERDRSGTDNS
GRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPL

Nucleotide Sequence
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GGCAGCACTCGTCCTAGTGTACTAT...

Zm00001d037537_T003 from maize genome v4

Amino Acid Sequence
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MDASYRRAGAGSGSAPRSVEDIYKDYRARRSAVLRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRRDWLALVAVHSDSWLISVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSGGVKQSKERDRSGTDNS
GRNKLSAKQTSEPRLENNAREPDEGYDEDDGYHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPL

Nucleotide Sequence
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GTGTACTATCATCTCGTCGCTCGGC...


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